CDS

Accession Number TCMCG016C06252
gbkey CDS
Protein Id OMO92786.1
Location join(2985..3097,3231..3386,3554..3639,4115..4240,4492..4619,5527..5664)
Organism Corchorus capsularis
locus_tag CCACVL1_06745

Protein

Length 248aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01008149.1
Definition Gamma-secretase subunit Aph-1 [Corchorus capsularis]
Locus_tag CCACVL1_06745

EGGNOG-MAPPER Annotation

COG_category S
Description Gamma-secretase subunit APH1-like
KEGG_TC -
KEGG_Module M00682        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
KEGG_ko ko:K06172        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04330        [VIEW IN KEGG]
ko05010        [VIEW IN KEGG]
map04330        [VIEW IN KEGG]
map05010        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004175        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016485        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051604        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0070765        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098797        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACAGTAGCGGCAGGGATCGGGTACGCGTTGCTGGCGTTAGGTCCGTCTCTTTCACTCTTCGTTTCTGTAATCTCCAAGAAGCCCTTTTTGATCCTCACTGTCCTCTCCAGTACATTGGTTTGGCTTATAAGTTTAATTATATTATCTGGAATTTGGAGAGGTTTCCTTCCTCTGAAATCGACAACATGGTGGCCTTTTGCAATTCTTATATTCTCATCCGTTGCCTTTCAAGAGGGCCTTCGCCTTCTTTTCTGGAAAGTTTACAAGAGATTAGAAGACATATTGGATGCTTTTGCTGATAGGGTTTCAAAGCCACGCCTTTATCTGACTGATAAGATGCAAATTGCTCTAGCTGGCGGGTTAGGTCATGGTGTGGCCCATGCAGTGTTCTTTTGTCTTAGCCTCTTAACGCCAGCATTTGGCCCAGCAACCTATTTTGTTGACAGTTGTTCACAGATGCCATTTTTCCTTGTGTCTGCGCTCATTGCACTTGCTTTTGTAACTGTTCACACTTTCTCAATGGTTATTGCATTTAATGGATATGCTGAAGGGAATAAAGTAGATCAAGTTTTTGTTCCCTCAGTTCATCTTGCTGCTGGAATGATGACTTTGATAAATTTTGCCTCTGGTGGCTGCATTATTGGGATTCCTCTTCTATTCTTGATGGCAGTCTTGACCTTGATGTACTGTGGGAGGATGGTGCGGAGAAGATTAACTGAAAACCAAAGGCAGGGTGATTCATAA
Protein:  
MTVAAGIGYALLALGPSLSLFVSVISKKPFLILTVLSSTLVWLISLIILSGIWRGFLPLKSTTWWPFAILIFSSVAFQEGLRLLFWKVYKRLEDILDAFADRVSKPRLYLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATYFVDSCSQMPFFLVSALIALAFVTVHTFSMVIAFNGYAEGNKVDQVFVPSVHLAAGMMTLINFASGGCIIGIPLLFLMAVLTLMYCGRMVRRRLTENQRQGDS